Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899650.1_cds_XP_016449647.1_44173
CDS Infomation

[gene=LOC107774580] [db_xref=GeneID:107774580] [protein=uncharacterized protein LOC107774580 isoform X5] [protein_id=XP_016449647.1] [location=join(34829..34872,35002..35116,35258..35386,35957..36004,36257..36441,36529..36725,36965..37257,37394..37543,37646..38041,39427..39576,39715..39790,40686..40813,41021..41221,41309..41431,41518..41634,43431..43658,44110..44280)] [gbkey=CDS]
Sequence

ATGTGTATATACAAAAAGTTGGTTGTTTCATGCAAGGAACACATGCCACTTTTTGCAAAT
AGTCTGCTCAGCATCATACAAACTCTCCTAGATCAGTCGCGGGAGAATGACATGCTAATT
GTCGGATGTGAAGCACTATTTGATTTTGTAAATAATCAGAAAGATGGTACTTACATGTTT
CATTTAGATGGTTTTATCCCAAAACTGTGTCAATTGGCACAGCAAATAGGAGAGGAGGAA
AGTGCAAAACATCTCCACACAGTTGGCCTGAAAGCACTTTCTGCAATGGTTTGGTTCATG
GGTGAATATTCCCATGTTTCAGCCGAGTTTGACAATATTGTTTCAGTAGTGTTGGAAAAT
TATCCAAGGCCAAGAAAGGAAACTCAAGACTCAAATCAGAACAGGTGGGTGGAAGAAGTG
CGCAAAGTTGAGGGCCACGTTTCTCCTTCCCCAGATGTCATTGCGAAGGTTCCCTCGTGG
AGAATCATTGTGAATGAGAAAGGGGAACTAAATATTTCAAAGGAGGATGCAGAAAACCCA
TCATTTTGGTCCAGGATTTGCCTGCATAACATTGCCAAACTAGGTAAGGAGGCTACAACC
ACACGGAGAGTTTTGGAATCTTTATTCTGCTACTTTGATGACGACAATTTATGGCCTACT
GAAACTGGAATTGCTTTACCTATTCTAAAGGATATGCAGTACACGATGGATGCTTCAGGA
GAGAATGCACATCTTCTGCTGTCAATATTAGTCAAGCACCTAGATCACAAAAATGTTCTT
AAACAACCTGAAATGCAGCTTGACATTGTTCAGGTTGTGACTTCGCTTGCTCAAACCACA
AAGATTCATCATTCCATGGCTCTAGTCAGTGCAGTGACCGATATCATGAGGCACTTACGG
AAAAGTATACATTATACGCTTGACGATGCAAAGCTGGGAGCCGAGTTAATAAAGTGGAAC
CGAAGTTTCCAGGAAGCTGTGGATGAATGCCTTGTGGAGTTATCAAATAAGGTTGGAGAT
GCAGGACCTATTCTTGATGTGATGGCAGTAATGTTAGAGAACATCTCAAGTATCAAAGTG
ATAGCAAGAACTACTATTGCTGCTGCTTACCGTGCTTCTCAAATCATAGCTTCTATGCCA
AATTTGTCATATCAAAACAAAGCATTCCCAGAGGCTTTATTTCATCAGTTACTCCCTGCT
ATGGTCCACCCTGATCATGAAACACGAGTTGGAGCTCATCGAATCTTTTCTGTTGTCCTT
GTTCCATCTTCTGTTTCTCCTCAGAAGATACCGGAGGACACCCACCAAAGGAAGGCAACA
GATTTTTCAAGGGCACTCTCTAGAACTGTTTCCGTCTTCTCTTCTTCAGCTGCTCTTTTT
GGAAAGCTGAGAGACCAGAGGTCTTCTTCGGCGGAGAATATTACCCTTGAGACGGAACAG
AAAGATAACAACAGCGGGATGCTCAACAGAATAAAATCAACATATAGCGGTGTATATAAC
ACGATAGGCTCTCCTGCACCTGTTGGAGAGTGTACAAACAAATCAAGTAAGGAAGCGGGT
CCTAAATCTCTAAGACTCAGCAGCCACCAAATCGTACTCCTGCTCTCCTCACTATGGGTA
CAATCCATTTCTCCTGCCAATATGCCTGAGAATTATGAAGCCATTGCTCACACATTTAGC
CTGGTCTTGCTATTTTCTAGAGCAAAGCACTCATACCGTGAAGCTCTAGTGCAAAGTTTT
CAGCTTGCATTTTCGTTAAGAAATGTCGCACTCGTTGAAGGAGGGTCACTACCACCATCA
CGTAAAAGATCTCTGTTTGTGTTGGCGACATCAATGATTCTTTTCTCATCAAAGGCATAT
AATATACCTTCTCTCATTCCGTGTGTCAAGGCTACACTTTCAGATAAAACGGTTGATCCA
TTTTTACATTTGGTTGAAGATAGCAAACTACAAGCTGCTGATTCAAGTTCTGGTTATGGA
AAAGTTATATATGGATCCAAAGAAGATGATAGTTCCGCTCAGAAATGTCTCTCGCAAATA
AATATCACTGAAGAACAGTCAACAGAATCCTTGGTTTCTTTAATCCTGAAGAGCTTATCT
AATCTACCAGATTTTGAAGTGTCAGCTACAAGGGAAGAGTTGCTTAAGGAATTTTCACCA
GATGATTCGGATTCCTTGGGGTCTCAGTTTTTAGCTGATGCTCAACATAGAGTTCAGCAG
TCTAATTCAGTTGATCTGTCCTCAATATTAGATGATGATGGTCCCGATTTGTCTCAAAGC
AGTTCCAAACAGAATGAACAATCCGCCATGGAAATTCCCAATCTGTTGAGTGTCAATCAA
CTTTTAGAATCTGTTTTGGAGACGGCACATCAAGTAGGGAGAATATCTTTGAGCAATGAA
CCTGATTTTTCTTACAAAGAAATGACTCATCATTGTGAGACACTTTTAACGGGAAAACAA
CAAAGGATGTACAATTTGATGAATAGCCAACATCGACAAGATAGTGCACTGATCAGAATA
TCACAGAATTCCAGTGAACAGGACAAAGAAAGCTCTTCCCATAACCAGGTTGAGAATCAG
GGGCAGGTTAAAAACCAACTCGTAGATCAGAAAGCGGCCAATGTTTCTCAAAAACCATCA
CCCGGAACTGTCGACTGGCATTGTGGAGCTCAATGTCAAAGTAATCCGGAGACGTTCAGA
CTACCAGCATCAAGTCCGTATGACAATTTTTTGAAAGCTGCAGGATGGTAG

Peptide Sequence

PEP ID

XP_016449647.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107774580 isoform X5 [Nicotiana tabacum]
Sequence

MCIYKKLVVSCKEHMPLFANSLLSIIQTLLDQSRENDMLIVGCEALFDFVNNQKDGTYMF
HLDGFIPKLCQLAQQIGEEESAKHLHTVGLKALSAMVWFMGEYSHVSAEFDNIVSVVLEN
YPRPRKETQDSNQNRWVEEVRKVEGHVSPSPDVIAKVPSWRIIVNEKGELNISKEDAENP
SFWSRICLHNIAKLGKEATTTRRVLESLFCYFDDDNLWPTETGIALPILKDMQYTMDASG
ENAHLLLSILVKHLDHKNVLKQPEMQLDIVQVVTSLAQTTKIHHSMALVSAVTDIMRHLR
KSIHYTLDDAKLGAELIKWNRSFQEAVDECLVELSNKVGDAGPILDVMAVMLENISSIKV
IARTTIAAAYRASQIIASMPNLSYQNKAFPEALFHQLLPAMVHPDHETRVGAHRIFSVVL
VPSSVSPQKIPEDTHQRKATDFSRALSRTVSVFSSSAALFGKLRDQRSSSAENITLETEQ
KDNNSGMLNRIKSTYSGVYNTIGSPAPVGECTNKSSKEAGPKSLRLSSHQIVLLLSSLWV
QSISPANMPENYEAIAHTFSLVLLFSRAKHSYREALVQSFQLAFSLRNVALVEGGSLPPS
RKRSLFVLATSMILFSSKAYNIPSLIPCVKATLSDKTVDPFLHLVEDSKLQAADSSSGYG
KVIYGSKEDDSSAQKCLSQINITEEQSTESLVSLILKSLSNLPDFEVSATREELLKEFSP
DDSDSLGSQFLADAQHRVQQSNSVDLSSILDDDGPDLSQSSSKQNEQSAMEIPNLLSVNQ
LLESVLETAHQVGRISLSNEPDFSYKEMTHHCETLLTGKQQRMYNLMNSQHRQDSALIRI
SQNSSEQDKESSSHNQVENQGQVKNQLVDQKAANVSQKPSPGTVDWHCGAQCQSNPETFR
LPASSPYDNFLKAAGW

Transcript Sequence

Gene sequence data has not been registered.